STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU210_015195FGE-sulfatase domain-containing protein. (281 aa)    
Predicted Functional Partners:
AU210_015194
DinB_2 domain-containing protein.
 
     0.930
AU210_001204
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
  0.857
AU210_004327
S10_plectin domain-containing protein.
   
 0.854
AU210_010613
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 0.852
AU210_006819
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.852
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.852
AU210_004037
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
  0.850
AU210_010548
Ribosomal_S10 domain-containing protein.
   
  0.843
AU210_008289
Uncharacterized protein.
   
  0.841
AU210_011770
Uncharacterized protein.
   
 0.840
Your Current Organism:
Fusarium oxysporum f. sp. radiciscucumerinum
NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum
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