STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU210_015376SGL domain-containing protein. (400 aa)    
Predicted Functional Partners:
AU210_007599
SGL domain-containing protein.
  
  
 
0.778
AU210_015221
SGL domain-containing protein.
  
  
 
0.771
AU210_004575
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
  
 0.704
AU210_005484
SGL domain-containing protein.
  
  
 
0.680
AU210_008707
Uncharacterized protein.
   
 
 0.676
AU210_006256
RNB domain-containing protein.
   
 
 0.653
AU210_000017
Uncharacterized protein.
   
 
 0.653
AU210_000682
RNB domain-containing protein.
   
 
 0.653
AU210_000753
Uncharacterized protein; Belongs to the RNR ribonuclease family.
   
 
 0.653
AU210_004407
Tr-type G domain-containing protein.
  
  
 0.641
Your Current Organism:
Fusarium oxysporum f. sp. radiciscucumerinum
NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum
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