STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU210_011719GYF domain-containing protein. (1433 aa)    
Predicted Functional Partners:
AU210_006495
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.942
AU210_010767
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 
 0.928
AU210_003594
RING-type domain-containing protein.
    
 
 0.685
AU210_003168
PAT1 domain-containing protein.
    
 
 0.560
AU210_001388
Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.
    
   0.559
AU210_008523
Uncharacterized protein.
    
 
 0.554
AU210_006500
Uncharacterized protein.
    
 
 0.554
AU210_006216
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.534
AU210_009316
Uncharacterized protein.
   
 
 0.516
AU210_010479
Uncharacterized protein.
   
 
 0.502
Your Current Organism:
Fusarium oxysporum f. sp. radiciscucumerinum
NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.