STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU210_008755Uncharacterized protein. (1336 aa)    
Predicted Functional Partners:
AU210_010006
Uncharacterized protein.
  
     0.531
AU210_010005
Uncharacterized protein.
  
     0.530
AU210_010007
Uncharacterized protein.
  
     0.526
AU210_011346
Uncharacterized protein.
  
     0.517
AU210_014828
Uncharacterized protein.
  
     0.498
AU210_014829
Uncharacterized protein.
  
     0.483
AU210_001998
Uncharacterized protein.
  
     0.451
AU210_001997
Uncharacterized protein.
  
     0.425
AU210_005421
Uncharacterized protein.
  
     0.406
AU210_005424
Uncharacterized protein.
  
     0.403
Your Current Organism:
Fusarium oxysporum f. sp. radiciscucumerinum
NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum
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