STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU210_009740Glyco_transf_28 domain-containing protein. (891 aa)    
Predicted Functional Partners:
AU210_003972
Uncharacterized protein.
     
 0.521
AU210_009852
Sulfotransfer_1 domain-containing protein.
     
 0.511
AU210_010364
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
     
 0.510
AU210_000297
S5A_REDUCTASE domain-containing protein.
     
 0.504
AU210_006324
PX domain-containing protein.
   
 
 0.446
AU210_005735
Uncharacterized protein.
   
 
 0.435
AU210_000359
Uncharacterized protein.
   
 
 0.435
AU210_014007
Uncharacterized protein.
    
  0.432
AU210_001749
Uncharacterized protein.
    
  0.432
Your Current Organism:
Fusarium oxysporum f. sp. radiciscucumerinum
NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum
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