STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU210_007561Uncharacterized protein. (453 aa)    
Predicted Functional Partners:
AU210_006444
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.909
AU210_009263
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.881
AU210_009576
Uncharacterized protein.
    
 0.881
AU210_007572
Uncharacterized protein.
    
 0.881
AU210_014287
Uncharacterized protein.
   
 0.867
AU210_010625
MIF4G domain-containing protein.
   
 0.867
AU210_006824
Uncharacterized protein.
   
 0.867
AU210_000990
Uncharacterized protein.
   
 0.867
AU210_003857
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.840
AU210_003252
S1 motif domain-containing protein.
   
 0.811
Your Current Organism:
Fusarium oxysporum f. sp. radiciscucumerinum
NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum
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