STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU210_004877Peptidase_M14 domain-containing protein. (445 aa)    
Predicted Functional Partners:
AU210_013885
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.742
AU210_014496
Uncharacterized protein.
    
 0.742
AU210_004557
Uncharacterized protein.
    
 0.742
AU210_004978
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.742
AU210_003992
Nucleoside diphosphate kinase.
   
  0.433
AU210_015103
Uncharacterized protein.
    
 0.411
AU210_015474
Uncharacterized protein.
    
 0.411
AU210_012957
Uncharacterized protein.
    
 0.411
AU210_013149
Uncharacterized protein.
    
 0.411
AU210_015408
Uncharacterized protein.
    
 0.411
Your Current Organism:
Fusarium oxysporum f. sp. radiciscucumerinum
NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum
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