Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AU210_000752 | AU210_003306 | A0A2H3I8K3 | A0A2H3HNY2 | CP-type G domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.997 |
AU210_000752 | AU210_004254 | A0A2H3I8K3 | A0A2H3HHF9 | CP-type G domain-containing protein. | Uncharacterized protein. | 0.990 |
AU210_000752 | AU210_005895 | A0A2H3I8K3 | A0A2H3H557 | CP-type G domain-containing protein. | Uncharacterized protein. | 0.999 |
AU210_000752 | AU210_006668 | A0A2H3I8K3 | A0A2H3H687 | CP-type G domain-containing protein. | TRASH domain-containing protein. | 0.993 |
AU210_000752 | AU210_010306 | A0A2H3I8K3 | A0A2H3GIV8 | CP-type G domain-containing protein. | Uncharacterized protein. | 0.993 |
AU210_000752 | AU210_010581 | A0A2H3I8K3 | A0A2H3H325 | CP-type G domain-containing protein. | Brix domain-containing protein. | 0.990 |
AU210_000752 | AU210_010582 | A0A2H3I8K3 | A0A2H3GZ78 | CP-type G domain-containing protein. | Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. | 0.992 |
AU210_000752 | AU210_011492 | A0A2H3I8K3 | A0A2H3GDS7 | CP-type G domain-containing protein. | RRM domain-containing protein. | 0.997 |
AU210_000752 | AU210_011887 | A0A2H3I8K3 | A0A2H3GWL3 | CP-type G domain-containing protein. | Uncharacterized protein. | 0.981 |
AU210_000752 | YTM1 | A0A2H3I8K3 | A0A2H3HGI9 | CP-type G domain-containing protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.996 |
AU210_003306 | AU210_000752 | A0A2H3HNY2 | A0A2H3I8K3 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | CP-type G domain-containing protein. | 0.997 |
AU210_003306 | AU210_004254 | A0A2H3HNY2 | A0A2H3HHF9 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Uncharacterized protein. | 0.992 |
AU210_003306 | AU210_005895 | A0A2H3HNY2 | A0A2H3H557 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Uncharacterized protein. | 0.992 |
AU210_003306 | AU210_006668 | A0A2H3HNY2 | A0A2H3H687 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | TRASH domain-containing protein. | 0.998 |
AU210_003306 | AU210_010306 | A0A2H3HNY2 | A0A2H3GIV8 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Uncharacterized protein. | 0.992 |
AU210_003306 | AU210_010581 | A0A2H3HNY2 | A0A2H3H325 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Brix domain-containing protein. | 0.979 |
AU210_003306 | AU210_010582 | A0A2H3HNY2 | A0A2H3GZ78 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. | 0.992 |
AU210_003306 | AU210_011492 | A0A2H3HNY2 | A0A2H3GDS7 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | RRM domain-containing protein. | 0.996 |
AU210_003306 | AU210_011887 | A0A2H3HNY2 | A0A2H3GWL3 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Uncharacterized protein. | 0.988 |
AU210_003306 | YTM1 | A0A2H3HNY2 | A0A2H3HGI9 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.993 |
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