STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU210_005260Uncharacterized protein; Belongs to the cytochrome P450 family. (439 aa)    
Predicted Functional Partners:
AU210_004557
Uncharacterized protein.
    
 0.741
AU210_004978
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.741
AU210_004876
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.552
AU210_003967
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
    
 0.538
AU210_003256
Uncharacterized protein.
   
 0.535
AU210_014156
Tryptophan synthase.
    
  0.519
AU210_007450
Lactamase_B domain-containing protein.
  
  0.519
AU210_010709
Tryptophan synthase.
    
  0.519
AU210_004131
2Fe-2S ferredoxin-type domain-containing protein.
  
  0.519
AU210_002690
Uncharacterized protein.
    
 0.506
Your Current Organism:
Fusarium oxysporum f. sp. radiciscucumerinum
NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.