STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU210_005858MARVEL domain-containing protein. (156 aa)    
Predicted Functional Partners:
AU210_001371
Uncharacterized protein; Belongs to the actin family.
    
 0.811
AU210_005007
Uncharacterized protein.
    
 0.810
AU210_010688
SWIB domain-containing protein.
    
 0.807
AU210_001026
Uncharacterized protein.
    
 0.794
AU210_006320
Uncharacterized protein.
    
 0.743
AU210_003596
SWIB domain-containing protein.
    
 0.723
AU210_004487
Uncharacterized protein.
    
 0.713
AU210_001608
Uncharacterized protein.
    
 0.713
AU210_006686
RRM domain-containing protein.
    
  0.692
AU210_010724
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
  0.644
Your Current Organism:
Fusarium oxysporum f. sp. radiciscucumerinum
NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.