STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU210_005137Uncharacterized protein. (628 aa)    
Predicted Functional Partners:
AU210_004557
Uncharacterized protein.
    
  0.733
AU210_004978
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.733
AU210_000782
YTH domain-containing protein.
    
  0.564
AU210_016579
ANK_REP_REGION domain-containing protein.
    
  0.521
AU210_001845
Uncharacterized protein.
    
  0.519
AU210_010677
Uncharacterized protein.
    
  0.511
AU210_003933
C2H2-type domain-containing protein.
    
  0.511
AU210_008119
Uncharacterized protein.
    
  0.508
AU210_004366
Uncharacterized protein.
   
  0.507
AU210_008153
Uncharacterized protein.
    
  0.505
Your Current Organism:
Fusarium oxysporum f. sp. radiciscucumerinum
NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum
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