STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU210_003396M20_dimer domain-containing protein. (416 aa)    
Predicted Functional Partners:
AU210_009382
N-acetyltransferase domain-containing protein.
  
 0.933
AU210_011330
Semialdhyde_dh domain-containing protein.
  
 0.933
AU210_008569
Uncharacterized protein.
  
 0.933
AU210_011451
Uncharacterized protein.
  
 0.868
AU210_004117
Uncharacterized protein.
  
 0.842
AU210_004337
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.827
AU210_004113
Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family.
     
 0.816
AU210_000348
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.811
AU210_002162
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
 0.806
AU210_001364
Histidine biosynthesis trifunctional protein.
    
 0.806
Your Current Organism:
Fusarium oxysporum f. sp. radiciscucumerinum
NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.