STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU210_004465Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (900 aa)    
Predicted Functional Partners:
AU210_010497
Protein kinase domain-containing protein.
   
 0.995
AU210_011594
Uncharacterized protein.
  
 0.978
AU210_013551
Protein kinase domain-containing protein.
   
 0.976
AU210_001891
Uncharacterized protein.
   
 0.976
AU210_006903
Uncharacterized protein.
   
 0.975
AU210_001216
ATG11 domain-containing protein.
   
 0.970
AU210_007651
Uncharacterized protein.
   
 0.954
AU210_009336
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
    
 0.927
AU210_010547
Uncharacterized protein.
    
   0.926
AU210_002594
Atg29_N domain-containing protein.
     
 0.885
Your Current Organism:
Fusarium oxysporum f. sp. radiciscucumerinum
NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.