STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU210_005428Uncharacterized protein. (328 aa)    
Predicted Functional Partners:
AU210_001054
Uncharacterized protein.
    
 0.744
AU210_009188
ERCC4 domain-containing protein.
    
 0.724
AU210_003241
Uncharacterized protein.
    
 0.632
AU210_011718
Ribonuclease P protein subunit.
   
 0.609
AU210_009203
Uncharacterized protein.
    
 0.609
AU210_000414
Uncharacterized protein.
    
 0.609
AU210_002868
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
   
 0.606
AU210_002505
Uncharacterized protein.
    
 0.604
AU210_008354
Uncharacterized protein.
    
  0.602
AU210_000808
ERCC4 domain-containing protein.
   
 0.600
Your Current Organism:
Fusarium oxysporum f. sp. radiciscucumerinum
NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum
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