STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU210_000357Uncharacterized protein. (814 aa)    
Predicted Functional Partners:
AU210_000358
Uncharacterized protein.
 
      0.804
AU210_003104
DNA_mis_repair domain-containing protein.
    
 
 0.501
AU210_000300
MutL_C domain-containing protein.
    
 
 0.500
AU210_000559
DNA_MISMATCH_REPAIR_2 domain-containing protein.
   
  
 0.489
AU210_000808
ERCC4 domain-containing protein.
      
 0.468
AU210_002473
Uncharacterized protein.
   
 
 0.456
AU210_002470
SEC63 domain-containing protein.
   
 
 0.456
AU210_003453
Uncharacterized protein.
   
  
 0.437
AU210_003454
DNA_MISMATCH_REPAIR_2 domain-containing protein.
   
  
 0.437
AU210_002987
Uncharacterized protein.
   
 
 0.413
Your Current Organism:
Fusarium oxysporum f. sp. radiciscucumerinum
NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.