STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU210_003270Uncharacterized protein. (133 aa)    
Predicted Functional Partners:
AU210_002777
Tr-type G domain-containing protein.
    
  0.644
AU210_004338
ACT domain-containing protein.
    
  0.616
AU210_013760
MR_MLE domain-containing protein.
    
  0.608
AU210_005437
AB hydrolase-1 domain-containing protein.
    
  0.608
AU210_010503
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 
 0.590
AU210_000272
Chorismate synthase.
    
  0.520
AU210_013226
Flavodoxin_2 domain-containing protein.
    
  0.503
AU210_002807
Chorismate mutase.
    
  0.498
AU210_008421
Uncharacterized protein.
    
  0.496
AU210_002489
Uncharacterized protein.
    
 
 0.486
Your Current Organism:
Fusarium oxysporum f. sp. radiciscucumerinum
NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum
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