STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU210_003017Uncharacterized protein. (578 aa)    
Predicted Functional Partners:
AU210_010125
Amidase domain-containing protein.
    
  0.663
AU210_010223
Amidase domain-containing protein.
    
  0.663
AU210_001419
WD_REPEATS_REGION domain-containing protein.
    
 0.607
AU210_002767
B30.2/SPRY domain-containing protein.
    
 0.606
AU210_000609
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.592
AU210_007978
Uncharacterized protein.
    
 0.587
AU210_002494
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.582
AU210_003997
UBA domain-containing protein.
    
  0.581
AU210_004757
Uncharacterized protein.
    
  0.574
AU210_003284
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.572
Your Current Organism:
Fusarium oxysporum f. sp. radiciscucumerinum
NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum
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