Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
OHU96587.1EBNA-1 nuclear protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (394 aa)    
Predicted Functional Partners:
OHU96586.1
Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.886
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
     
  0.768
glsA
Glutaminase; Catalyzes the formation of glutamate from glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family.
     
  0.768
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
     
  0.768
OHU96584.1
HflC protein; HflC and HflK could regulate a protease.
       0.543
OHU96585.1
HflK protein; HflC and HflK could encode or regulate a protease.
       0.543
OHU97717.1
MR-MLE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.523
OHU94353.1
Glycogen synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.501
OHU96750.1
L-asparaginase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.457
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
     
  0.457
Your Current Organism:
Pseudoalteromonas byunsanensis
NCBI taxonomy Id: 327939
Other names: JCM 12483, KCTC 12274, P. byunsanensis, Pseudoalteromonas byunsanensis Park et al. 2005, strain FR1199
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