Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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Databases
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[Homology]
Score
OHU96269.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)    
Predicted Functional Partners:
OHU96270.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.953
OHU96405.1
Type IV pilin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.952
OHU96268.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.923
OHU96271.1
Type II secretion system protein GspH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.900
OHU95050.1
Pilin biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.859
OHU95049.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.724
OHU95053.1
Type IV pilus modification protein PilV; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.722
OHU95051.1
Pilus assembly protein PilX; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.720
OHU96265.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.692
OHU96266.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.692
Your Current Organism:
Pseudoalteromonas byunsanensis
NCBI taxonomy Id: 327939
Other names: JCM 12483, KCTC 12274, P. byunsanensis, Pseudoalteromonas byunsanensis Park et al. 2005, strain FR1199
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