STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHU93601.1Alkaline serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. (616 aa)    
Predicted Functional Partners:
OHU94212.1
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
 
 
0.610
OHU95171.1
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.556
OHU93724.1
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
  
  
  0.546
OHU97183.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.516
OHU93719.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.497
OHU93600.1
Aminotransferase class V; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.479
OHU96120.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.453
secY
Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
   0.453
OHU94977.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.434
OHU96531.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.425
Your Current Organism:
Pseudoalteromonas byunsanensis
NCBI taxonomy Id: 327939
Other names: JCM 12483, KCTC 12274, P. byunsanensis, Pseudoalteromonas byunsanensis Park et al. 2005, strain FR1199
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