Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG09541.1 | OJG09563.1 | RU93_GL000701 | RU93_GL000723 | Glutamine amidotransferase. | Hypothetical protein; Belongs to the MurCDEF family. MurE subfamily. | 0.958 |
OJG09541.1 | murG | RU93_GL000701 | RU93_GL002277 | Glutamine amidotransferase. | Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.925 |
OJG09562.1 | OJG09563.1 | RU93_GL000722 | RU93_GL000723 | Hypothetical protein. | Hypothetical protein; Belongs to the MurCDEF family. MurE subfamily. | 0.893 |
OJG09562.1 | OJG10255.1 | RU93_GL000722 | RU93_GL002280 | Hypothetical protein. | Hypothetical protein. | 0.470 |
OJG09563.1 | OJG09541.1 | RU93_GL000723 | RU93_GL000701 | Hypothetical protein; Belongs to the MurCDEF family. MurE subfamily. | Glutamine amidotransferase. | 0.958 |
OJG09563.1 | OJG09562.1 | RU93_GL000723 | RU93_GL000722 | Hypothetical protein; Belongs to the MurCDEF family. MurE subfamily. | Hypothetical protein. | 0.893 |
OJG09563.1 | OJG10234.1 | RU93_GL000723 | RU93_GL002259 | Hypothetical protein; Belongs to the MurCDEF family. MurE subfamily. | Glycosyl transferase, group 4 family protein. | 0.707 |
OJG09563.1 | OJG10255.1 | RU93_GL000723 | RU93_GL002280 | Hypothetical protein; Belongs to the MurCDEF family. MurE subfamily. | Hypothetical protein. | 0.767 |
OJG09563.1 | mraY | RU93_GL000723 | RU93_GL002279 | Hypothetical protein; Belongs to the MurCDEF family. MurE subfamily. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.824 |
OJG09563.1 | murA-2 | RU93_GL000723 | RU93_GL001557 | Hypothetical protein; Belongs to the MurCDEF family. MurE subfamily. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.703 |
OJG09563.1 | murC | RU93_GL000723 | RU93_GL000170 | Hypothetical protein; Belongs to the MurCDEF family. MurE subfamily. | UDP-N-acetylmuramate-L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.772 |
OJG09563.1 | murD | RU93_GL000723 | RU93_GL002278 | Hypothetical protein; Belongs to the MurCDEF family. MurE subfamily. | UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.989 |
OJG09563.1 | murF | RU93_GL000723 | RU93_GL000995 | Hypothetical protein; Belongs to the MurCDEF family. MurE subfamily. | UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.994 |
OJG09563.1 | murG | RU93_GL000723 | RU93_GL002277 | Hypothetical protein; Belongs to the MurCDEF family. MurE subfamily. | Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.901 |
OJG10234.1 | OJG09563.1 | RU93_GL002259 | RU93_GL000723 | Glycosyl transferase, group 4 family protein. | Hypothetical protein; Belongs to the MurCDEF family. MurE subfamily. | 0.707 |
OJG10234.1 | OJG10255.1 | RU93_GL002259 | RU93_GL002280 | Glycosyl transferase, group 4 family protein. | Hypothetical protein. | 0.462 |
OJG10234.1 | murA-2 | RU93_GL002259 | RU93_GL001557 | Glycosyl transferase, group 4 family protein. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.561 |
OJG10234.1 | murC | RU93_GL002259 | RU93_GL000170 | Glycosyl transferase, group 4 family protein. | UDP-N-acetylmuramate-L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.631 |
OJG10234.1 | murD | RU93_GL002259 | RU93_GL002278 | Glycosyl transferase, group 4 family protein. | UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.797 |
OJG10234.1 | murF | RU93_GL002259 | RU93_GL000995 | Glycosyl transferase, group 4 family protein. | UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.899 |
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