Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG09219.1 | OJG09269.1 | RU93_GL000930 | RU93_GL000876 | Dihydrolipoyl dehydrogenase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.948 |
OJG09219.1 | OJG09994.1 | RU93_GL000930 | RU93_GL000444 | Dihydrolipoyl dehydrogenase. | Alanine-synthesizing transaminase AlaT. | 0.464 |
OJG09219.1 | OJG11564.1 | RU93_GL000930 | RU93_GL001559 | Dihydrolipoyl dehydrogenase. | Glutamine synthetase. | 0.938 |
OJG09219.1 | OJG11768.1 | RU93_GL000930 | RU93_GL001001 | Dihydrolipoyl dehydrogenase. | Citrate synthase; Belongs to the citrate synthase family. | 0.427 |
OJG09269.1 | OJG09219.1 | RU93_GL000876 | RU93_GL000930 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Dihydrolipoyl dehydrogenase. | 0.948 |
OJG09269.1 | OJG09994.1 | RU93_GL000876 | RU93_GL000444 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Alanine-synthesizing transaminase AlaT. | 0.933 |
OJG09269.1 | OJG11145.1 | RU93_GL000876 | RU93_GL001632 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Hypothetical protein. | 0.939 |
OJG09269.1 | OJG11564.1 | RU93_GL000876 | RU93_GL001559 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamine synthetase. | 0.953 |
OJG09269.1 | OJG11768.1 | RU93_GL000876 | RU93_GL001001 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Citrate synthase; Belongs to the citrate synthase family. | 0.962 |
OJG09269.1 | OJG11770.1 | RU93_GL000876 | RU93_GL001003 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Isocitrate dehydrogenase, NADP-dependent. | 0.952 |
OJG09269.1 | OJG12223.1 | RU93_GL000876 | RU93_GL000153 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.933 |
OJG09269.1 | argJ | RU93_GL000876 | RU93_GL001672 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Ornithine acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.933 |
OJG09269.1 | gshAB | RU93_GL000876 | RU93_GL001023 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate--cysteine ligase; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; In the N-terminal section; belongs to the glutamate--cysteine ligase type 1 family. Type 2 subfamily. | 0.931 |
OJG09269.1 | proA | RU93_GL000876 | RU93_GL001828 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.933 |
OJG09994.1 | OJG09219.1 | RU93_GL000444 | RU93_GL000930 | Alanine-synthesizing transaminase AlaT. | Dihydrolipoyl dehydrogenase. | 0.464 |
OJG09994.1 | OJG09269.1 | RU93_GL000444 | RU93_GL000876 | Alanine-synthesizing transaminase AlaT. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.933 |
OJG09994.1 | OJG11145.1 | RU93_GL000444 | RU93_GL001632 | Alanine-synthesizing transaminase AlaT. | Hypothetical protein. | 0.506 |
OJG09994.1 | OJG11564.1 | RU93_GL000444 | RU93_GL001559 | Alanine-synthesizing transaminase AlaT. | Glutamine synthetase. | 0.550 |
OJG09994.1 | OJG11768.1 | RU93_GL000444 | RU93_GL001001 | Alanine-synthesizing transaminase AlaT. | Citrate synthase; Belongs to the citrate synthase family. | 0.649 |
OJG09994.1 | OJG11770.1 | RU93_GL000444 | RU93_GL001003 | Alanine-synthesizing transaminase AlaT. | Isocitrate dehydrogenase, NADP-dependent. | 0.913 |
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