STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG11446.1Multidrug resistance-like ATP-binding protein mdlA. (583 aa)    
Predicted Functional Partners:
OJG11445.1
ABC transporter ATP-binding protein.
 
  
 
0.970
OJG11558.1
Multidrug ABC transporter permease.
 
  
 
0.877
OJG11935.1
Hypothetical protein.
   
 0.678
OJG11447.1
Hypothetical protein.
       0.606
OJG09878.1
ABC transporter ATP-binding protein/permease.
 
 
0.506
OJG11571.1
ABC transporter ATP-binding protein/permease.
 
 
0.503
OJG10440.1
ABC transporter, ATP-binding protein.
 
 
0.497
OJG10978.1
Hypothetical protein.
 
 
0.491
OJG10121.1
Lipid A export ATP-binding/permease MsbA.
 
 
0.478
nfo
Apurinic endonuclease (APN1); Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.
       0.472
Your Current Organism:
Enterococcus aquimarinus
NCBI taxonomy Id: 328396
Other names: API 8407116, CCM 7283, CCUG 51308, DSM 17690, E. aquimarinus, Enterococcus aquamarinus, Enterococcus aquimarinus Svec et al. 2005, LMG 16607, LMG:16607
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