Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG10260.1 | OJG11479.1 | RU93_GL002285 | RU93_GL001474 | Magnesium transporter. | Hypothetical protein. | 0.405 |
OJG10454.1 | OJG11479.1 | RU93_GL002233 | RU93_GL001474 | Hypothetical protein. | Hypothetical protein. | 0.405 |
OJG11476.1 | OJG11477.1 | RU93_GL001471 | RU93_GL001472 | Hypothetical protein. | PTS system cellobiose-specific transporter subunit IIB. | 0.567 |
OJG11476.1 | OJG11478.1 | RU93_GL001471 | RU93_GL001473 | Hypothetical protein. | Hypothetical protein. | 0.481 |
OJG11476.1 | OJG11479.1 | RU93_GL001471 | RU93_GL001474 | Hypothetical protein. | Hypothetical protein. | 0.819 |
OJG11477.1 | OJG11476.1 | RU93_GL001472 | RU93_GL001471 | PTS system cellobiose-specific transporter subunit IIB. | Hypothetical protein. | 0.567 |
OJG11477.1 | OJG11478.1 | RU93_GL001472 | RU93_GL001473 | PTS system cellobiose-specific transporter subunit IIB. | Hypothetical protein. | 0.543 |
OJG11477.1 | OJG11479.1 | RU93_GL001472 | RU93_GL001474 | PTS system cellobiose-specific transporter subunit IIB. | Hypothetical protein. | 0.409 |
OJG11478.1 | OJG11476.1 | RU93_GL001473 | RU93_GL001471 | Hypothetical protein. | Hypothetical protein. | 0.481 |
OJG11478.1 | OJG11477.1 | RU93_GL001473 | RU93_GL001472 | Hypothetical protein. | PTS system cellobiose-specific transporter subunit IIB. | 0.543 |
OJG11478.1 | OJG11479.1 | RU93_GL001473 | RU93_GL001474 | Hypothetical protein. | Hypothetical protein. | 0.536 |
OJG11479.1 | OJG10260.1 | RU93_GL001474 | RU93_GL002285 | Hypothetical protein. | Magnesium transporter. | 0.405 |
OJG11479.1 | OJG10454.1 | RU93_GL001474 | RU93_GL002233 | Hypothetical protein. | Hypothetical protein. | 0.405 |
OJG11479.1 | OJG11476.1 | RU93_GL001474 | RU93_GL001471 | Hypothetical protein. | Hypothetical protein. | 0.819 |
OJG11479.1 | OJG11477.1 | RU93_GL001474 | RU93_GL001472 | Hypothetical protein. | PTS system cellobiose-specific transporter subunit IIB. | 0.409 |
OJG11479.1 | OJG11478.1 | RU93_GL001474 | RU93_GL001473 | Hypothetical protein. | Hypothetical protein. | 0.536 |
OJG11479.1 | OJG12250.1 | RU93_GL001474 | RU93_GL000180 | Hypothetical protein. | SAM-dependent methyltransferase. | 0.448 |
OJG12250.1 | OJG11479.1 | RU93_GL000180 | RU93_GL001474 | SAM-dependent methyltransferase. | Hypothetical protein. | 0.448 |