Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG09325.1 | OJG11524.1 | RU93_GL000811 | RU93_GL001519 | Hypothetical protein. | ABC transporter membrane-spanning permease. | 0.477 |
OJG09414.1 | OJG11524.1 | RU93_GL000745 | RU93_GL001519 | CAAX amino terminal protease. | ABC transporter membrane-spanning permease. | 0.477 |
OJG11523.1 | OJG11524.1 | RU93_GL001518 | RU93_GL001519 | Hypothetical protein. | ABC transporter membrane-spanning permease. | 0.752 |
OJG11523.1 | OJG11525.1 | RU93_GL001518 | RU93_GL001520 | Hypothetical protein. | ABC transporter ATP-binding protein. | 0.690 |
OJG11523.1 | uvrC | RU93_GL001518 | RU93_GL001521 | Hypothetical protein. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.550 |
OJG11524.1 | OJG09325.1 | RU93_GL001519 | RU93_GL000811 | ABC transporter membrane-spanning permease. | Hypothetical protein. | 0.477 |
OJG11524.1 | OJG09414.1 | RU93_GL001519 | RU93_GL000745 | ABC transporter membrane-spanning permease. | CAAX amino terminal protease. | 0.477 |
OJG11524.1 | OJG11523.1 | RU93_GL001519 | RU93_GL001518 | ABC transporter membrane-spanning permease. | Hypothetical protein. | 0.752 |
OJG11524.1 | OJG11525.1 | RU93_GL001519 | RU93_GL001520 | ABC transporter membrane-spanning permease. | ABC transporter ATP-binding protein. | 0.998 |
OJG11524.1 | OJG11527.1 | RU93_GL001519 | RU93_GL001522 | ABC transporter membrane-spanning permease. | Thioredoxin; Belongs to the thioredoxin family. | 0.477 |
OJG11524.1 | OJG11529.1 | RU93_GL001519 | RU93_GL001524 | ABC transporter membrane-spanning permease. | Hypothetical protein. | 0.443 |
OJG11524.1 | OJG11828.1 | RU93_GL001519 | RU93_GL001061 | ABC transporter membrane-spanning permease. | Hypothetical protein. | 0.435 |
OJG11524.1 | OJG12182.1 | RU93_GL001519 | RU93_GL000112 | ABC transporter membrane-spanning permease. | Hypothetical protein; Belongs to the UPF0374 family. | 0.417 |
OJG11524.1 | uvrC | RU93_GL001519 | RU93_GL001521 | ABC transporter membrane-spanning permease. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.628 |
OJG11525.1 | OJG11523.1 | RU93_GL001520 | RU93_GL001518 | ABC transporter ATP-binding protein. | Hypothetical protein. | 0.690 |
OJG11525.1 | OJG11524.1 | RU93_GL001520 | RU93_GL001519 | ABC transporter ATP-binding protein. | ABC transporter membrane-spanning permease. | 0.998 |
OJG11525.1 | OJG11527.1 | RU93_GL001520 | RU93_GL001522 | ABC transporter ATP-binding protein. | Thioredoxin; Belongs to the thioredoxin family. | 0.513 |
OJG11525.1 | OJG11529.1 | RU93_GL001520 | RU93_GL001524 | ABC transporter ATP-binding protein. | Hypothetical protein. | 0.480 |
OJG11525.1 | uvrC | RU93_GL001520 | RU93_GL001521 | ABC transporter ATP-binding protein. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.671 |
OJG11527.1 | OJG11524.1 | RU93_GL001522 | RU93_GL001519 | Thioredoxin; Belongs to the thioredoxin family. | ABC transporter membrane-spanning permease. | 0.477 |
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