Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG10919.1 | OJG10921.1 | RU93_GL001792 | RU93_GL001794 | Hypothetical protein. | Hypothetical protein. | 0.890 |
OJG10919.1 | OJG10922.1 | RU93_GL001792 | RU93_GL001795 | Hypothetical protein. | Chromosome partitioning protein ParB; Belongs to the ParB family. | 0.879 |
OJG10919.1 | OJG10923.1 | RU93_GL001792 | RU93_GL001796 | Hypothetical protein. | Sporulation initiation inhibitor Soj. | 0.819 |
OJG10919.1 | OJG11252.1 | RU93_GL001792 | RU93_GL001739 | Hypothetical protein. | Hypothetical protein. | 0.769 |
OJG10919.1 | OJG11455.1 | RU93_GL001792 | RU93_GL001450 | Hypothetical protein. | Hypothetical protein. | 0.743 |
OJG10919.1 | OJG11546.1 | RU93_GL001792 | RU93_GL001541 | Hypothetical protein. | Hypothetical protein. | 0.745 |
OJG10919.1 | OJG11816.1 | RU93_GL001792 | RU93_GL001049 | Hypothetical protein. | ABC transporter membrane protein. | 0.719 |
OJG10919.1 | ezrA | RU93_GL001792 | RU93_GL001578 | Hypothetical protein. | Septation ring formation protein EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.758 |
OJG10919.1 | guaB | RU93_GL001792 | RU93_GL001791 | Hypothetical protein. | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.848 |
OJG10919.1 | ychF | RU93_GL001792 | RU93_GL001793 | Hypothetical protein. | GTP-dependent nucleic acid-binding protein engD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.898 |
OJG10921.1 | OJG10919.1 | RU93_GL001794 | RU93_GL001792 | Hypothetical protein. | Hypothetical protein. | 0.890 |
OJG10921.1 | OJG10922.1 | RU93_GL001794 | RU93_GL001795 | Hypothetical protein. | Chromosome partitioning protein ParB; Belongs to the ParB family. | 0.914 |
OJG10921.1 | OJG10923.1 | RU93_GL001794 | RU93_GL001796 | Hypothetical protein. | Sporulation initiation inhibitor Soj. | 0.867 |
OJG10921.1 | guaB | RU93_GL001794 | RU93_GL001791 | Hypothetical protein. | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.826 |
OJG10921.1 | ychF | RU93_GL001794 | RU93_GL001793 | Hypothetical protein. | GTP-dependent nucleic acid-binding protein engD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.955 |
OJG10922.1 | OJG10919.1 | RU93_GL001795 | RU93_GL001792 | Chromosome partitioning protein ParB; Belongs to the ParB family. | Hypothetical protein. | 0.879 |
OJG10922.1 | OJG10921.1 | RU93_GL001795 | RU93_GL001794 | Chromosome partitioning protein ParB; Belongs to the ParB family. | Hypothetical protein. | 0.914 |
OJG10922.1 | OJG10923.1 | RU93_GL001795 | RU93_GL001796 | Chromosome partitioning protein ParB; Belongs to the ParB family. | Sporulation initiation inhibitor Soj. | 0.997 |
OJG10922.1 | guaB | RU93_GL001795 | RU93_GL001791 | Chromosome partitioning protein ParB; Belongs to the ParB family. | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.561 |
OJG10922.1 | ychF | RU93_GL001795 | RU93_GL001793 | Chromosome partitioning protein ParB; Belongs to the ParB family. | GTP-dependent nucleic acid-binding protein engD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.916 |
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