Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMVIP00005000293annotation not available (335 aa)    
Predicted Functional Partners:
CFAP43
WD repeat-containing protein 96.
   
 
 0.933
N305_13734
WD repeat-containing protein 66.
 
     0.920
CFAP44
Uncharacterized protein.
   
 0.898
WDR78
WD repeat-containing protein 78.
   
 
 0.896
WDR63
WD repeat domain 63.
   
 
 0.895
N305_06284
Protein MAATS1.
   
 
 0.892
TTC29
Tetratricopeptide repeat protein 29.
   
 0.891
DNALI1
Dynein axonemal light intermediate chain 1.
   
 
 0.874
IQUB
IQ and ubiquitin-like domain-containing protein.
   
   0.841
GAS8
Growth arrest-specific protein 8.
    
 
 0.841
Your Current Organism:
Manacus vitellinus
NCBI taxonomy Id: 328815
Other names: M. vitellinus, golden-collared manakin
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