STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM25Transmembrane protein 25. (411 aa)    
Predicted Functional Partners:
HGD
Homogentisate 1,2-dioxygenase.
   
  
 0.733
PLPPR4
Lipid phosphate phosphatase-related protein type 4.
      
 0.509
PAK6
Serine/threonine-protein kinase PAK 6.
      
 0.508
TMEM207
Transmembrane protein 207.
      
 0.471
ANKRD13B
Ankyrin repeat domain-containing protein 13B.
      
 0.446
ANKRD13A
Ankyrin repeat domain-containing protein 13A.
      
 0.446
HAAO
3-hydroxyanthranilate 3,4-dioxygenase.
   
  
 0.440
HPD
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.430
HPDL
4-hydroxyphenylpyruvate dioxygenase like.
   
 
 0.430
ENSMVIP00005021380
annotation not available
   
 
 0.430
Your Current Organism:
Manacus vitellinus
NCBI taxonomy Id: 328815
Other names: M. vitellinus, golden-collared manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.