Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMAD7Mothers against decapentaplegic 7. (268 aa)    
Predicted Functional Partners:
SMURF2
E3 ubiquitin-protein ligase SMURF2.
    
 0.999
SMURF1
E3 ubiquitin-protein ligase SMURF1.
    
 0.999
TGFBR1
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.
    
 0.999
SMAD4
Mothers against decapentaplegic homolog.
    
0.994
TGFBR2
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.993
SMAD2
Mothers against decapentaplegic homolog.
    
0.992
SMAD3
Mothers against decapentaplegic homolog.
    
0.992
ACVR1B
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.
    
 0.985
SMAD6
Mothers against decapentaplegic 6.
  
 
 
0.985
SMAD9
Mothers against decapentaplegic homolog.
    
0.980
Your Current Organism:
Manacus vitellinus
NCBI taxonomy Id: 328815
Other names: M. vitellinus, golden-collared manakin
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