Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRSS12Serine protease 12. (742 aa)    
Predicted Functional Partners:
SCN4B
Sodium channel subunit beta-4.
      
 0.697
NME8
Thioredoxin domain-containing protein 3.
    
 0.688
WDR90
WD repeat-containing protein 90.
    
 0.659
MGAT5
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A.
    
 0.648
CRBN
Protein cereblon.
      
 0.617
MNS1
Meiosis-specific nuclear structural protein 1.
    
  0.595
MMP9
Matrix metalloproteinase-9.
     
 0.592
SERPINI1
Neuroserpin; Belongs to the serpin family.
   
 0.584
APIP
Methylthioribulose-1-phosphate dehydratase.
      
 0.577
CHRNB3
Neuronal acetylcholine receptor subunit beta-3.
      
 0.575
Your Current Organism:
Manacus vitellinus
NCBI taxonomy Id: 328815
Other names: M. vitellinus, golden-collared manakin
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