STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARNTLAryl hydrocarbon receptor nuclear translocator-like 1. (633 aa)    
Predicted Functional Partners:
CRY1
Cryptochrome-1.
   
 0.993
CRY2
Cryptochrome-2.
   
 0.992
CLOCK
Circadian locomoter output cycles protein kaput.
   
0.965
NPAS2
Neuronal PAS domain protein 2.
   
0.960
PER2
Period circadian protein 2.
    
0.929
PER3
Period circadian protein 3.
    
0.929
CSNK1E
Casein kinase I isoform epsilon.
    
 0.926
CSNK1D
Casein kinase I isoform delta.
    
 0.924
CREBBP
CREB binding protein.
    
 0.919
N305_05453
Neuronal PAS domain-containing protein 2.
   
0.918
Your Current Organism:
Manacus vitellinus
NCBI taxonomy Id: 328815
Other names: M. vitellinus, golden-collared manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.