STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108643519E-selectin-like. (454 aa)    
Predicted Functional Partners:
GLG1
Golgi apparatus protein 1.
    
 0.914
SNX17
Sorting nexin-17.
    
 
 0.784
CD44
CD44 antigen.
   
 0.725
ENSMVIP00005022175
annotation not available
    
 0.721
CD34
CD34 molecule.
   
 
 0.707
AP2M1
Adaptor related protein complex 2 subunit mu 1.
    
  0.699
SVEP1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
0.677
ENSMVIP00005001590
annotation not available
    
 0.639
TNC
Tenascin C.
    
 0.639
TNR
Tenascin-R.
    
 0.639
Your Current Organism:
Manacus vitellinus
NCBI taxonomy Id: 328815
Other names: M. vitellinus, golden-collared manakin
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.