STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN7UBX domain-containing protein 7. (470 aa)    
Predicted Functional Partners:
SPATA5
Spermatogenesis-associated protein 5.
   
 0.999
UFD1
Ubiquitin fusion degradation protein 1.
    
 0.999
CUL2
Cullin-2; Belongs to the cullin family.
    
 0.999
PSMB2
Proteasome subunit beta.
    
  0.999
NPLOC4
Nuclear protein localization protein 4.
    
 0.999
ENSMVIP00005018024
annotation not available
    
 0.999
VCP
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 0.999
SPATA5L1
Spermatogenesis-associated protein 5-like 1; Belongs to the AAA ATPase family.
   
 0.999
KATNAL2
Katanin catalytic subunit A1 like 2.
   
 0.998
ELOC
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
   
 0.998
Your Current Organism:
Manacus vitellinus
NCBI taxonomy Id: 328815
Other names: M. vitellinus, golden-collared manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.