STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMTC1Transmembrane and TPR repeat-containing protein 1. (861 aa)    
Predicted Functional Partners:
LEO1
RNA polymerase-associated protein LEO1.
    
 0.919
INTS1
Integrator complex subunit 1.
    
 0.917
INTS13
Protein asunder.
    
 0.913
INTS3
Integrator complex subunit 3.
    
 0.900
INTS10
Integrator complex subunit 10.
    
 0.881
BBS9
Protein PTHB1.
    
 0.858
AK9
Adenylate kinase 9.
   
 0.856
CDC73
Parafibromin.
    
 0.847
CDC16
Cell division cycle protein 16.
    
 0.846
ANAPC1
Anaphase-promoting complex subunit 1.
    
 0.844
Your Current Organism:
Manacus vitellinus
NCBI taxonomy Id: 328815
Other names: M. vitellinus, golden-collared manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.