STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC6A6Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (694 aa)    
Predicted Functional Partners:
SLC1A1
Amino acid transporter.
    
 0.582
SLC1A2
Amino acid transporter.
    
 0.541
CDS1
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 
 0.537
SLC6A2
Sodium-dependent noradrenaline transporter.
  
  
 
0.534
SLC1A7
Amino acid transporter.
    
 0.514
LOC103758034
Amino acid transporter.
    
 0.514
SLC1A3
Amino acid transporter.
    
 0.510
ENSMVIP00005023850
annotation not available
    
 0.510
SLC1A6
Amino acid transporter.
    
 0.510
STX2
Syntaxin-2; Belongs to the syntaxin family.
    
 0.498
Your Current Organism:
Manacus vitellinus
NCBI taxonomy Id: 328815
Other names: M. vitellinus, golden-collared manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.