STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N305_07064Ig-like domain-containing protein. (191 aa)    
Predicted Functional Partners:
N305_00284
Ig-like domain-containing protein.
   
  0.847
N305_00008
HLA class II histocompatibility antigen, DR alpha chain.
    
  0.798
HGFAC
Hepatocyte growth factor activator.
    
 0.789
HABP2
Hyaluronan-binding protein 2.
    
 0.789
LRIT3
Leucine rich repeat, Ig-like and transmembrane domains 3.
    
 0.770
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
 0.770
ENSMVIP00005005951
annotation not available
    
 0.745
LOC103758410
Tyrosine-protein phosphatase non-receptor type substrate 1.
    
 0.745
ENSMVIP00005007571
annotation not available
    
 0.745
N305_00339
Syntaxin-16.
    
  0.716
Your Current Organism:
Manacus vitellinus
NCBI taxonomy Id: 328815
Other names: M. vitellinus, golden-collared manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.