STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMX57467.1isovaleryl-CoA dehydrogenase. (386 aa)    
Predicted Functional Partners:
AMX57464.1
Electron transfer flavoprotein subunit alpha.
 0.972
AMX57465.1
Electron transfer flavoprotein subunit beta.
 
 0.959
AMX58682.1
acetyl-CoA carboxylase.
  
 0.892
AMX56998.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.840
AMX58759.1
acetyl-CoA acetyltransferase.
  
 0.840
AMX57048.1
3-ketoacyl-CoA thiolase.
   
  0.809
AMX58930.1
3-oxoacid CoA-transferase.
  
 
 0.795
AMX57684.1
Crotonase.
  
  0.699
AMX59805.1
enoyl-CoA hydratase.
  
  0.691
AMX57183.1
Aminomethyltransferase.
    
 0.690
Your Current Organism:
Leptospira borgpetersenii Hardjo
NCBI taxonomy Id: 328971
Other names: L. borgpetersenii serovar Hardjo, Leptospira borgpetersenii serovar Hardjo
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.