STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMX57989.1Oxidoreductase. (344 aa)    
Predicted Functional Partners:
AMX57990.1
Inositol phosphatase.
    
 0.847
AMX57988.1
3-deoxy-manno-octulosonate cytidylyltransferase.
       0.828
AMX57987.1
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase.
 
     0.801
AMX57986.1
Phosphoheptose isomerase.
 
     0.738
AMX59427.1
Oxidoreductase.
  
  
  0.690
AMX57627.1
Oxidoreductase.
  
     0.685
AMX57980.1
Pyridoxal-5'-phosphate-dependent protein.
  
 
  0.678
AMX59080.1
UDP-N-acetylglucosamine 2-epimerase.
  
 
 0.672
AMX58503.1
lysine--tRNA ligase.
  
    0.633
AMX59394.1
Aldehyde dehydrogenase.
   
 
 0.617
Your Current Organism:
Leptospira borgpetersenii Hardjo
NCBI taxonomy Id: 328971
Other names: L. borgpetersenii serovar Hardjo, Leptospira borgpetersenii serovar Hardjo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.