STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMX58176.1Malate dehydrogenase. (326 aa)    
Predicted Functional Partners:
AMX57363.1
Citrate synthase.
  
 0.995
gltA
Type II citrate synthase.
  
 0.995
AMX59719.1
Malate dehydrogenase.
  
 0.981
fumC
Fumarate hydratase.
  
 0.977
AMX58168.1
Aspartate aminotransferase.
   
 0.963
AMX59118.1
Glutamate synthase.
  
 
 0.962
AMX59910.1
methylmalonyl-CoA mutase.
    
 0.948
AMX57617.1
succinyl-CoA synthetase subunit alpha.
  
 0.946
AMX57123.1
Phosphoenolpyruvate carboxykinase.
  
 
 0.937
AMX59909.1
methylmalonyl-CoA mutase.
    
 0.937
Your Current Organism:
Leptospira borgpetersenii Hardjo
NCBI taxonomy Id: 328971
Other names: L. borgpetersenii serovar Hardjo, Leptospira borgpetersenii serovar Hardjo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.