STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMX58625.1rRNA methyltransferase. (253 aa)    
Predicted Functional Partners:
AMX57524.1
50S ribosomal protein L11.
  
   0.952
AMX58624.1
cysteine--tRNA ligase.
  
 
 0.940
AMX57265.1
50S ribosomal protein L15.
 
 
   0.916
AMX59720.1
tRNA modification GTPase MnmE.
 
 
 
 0.914
AMX59743.1
GTP-binding protein.
  
 
 0.914
AMX57499.1
50S ribosomal protein L13.
 
 
 
 0.911
AMX57247.1
50S ribosomal protein L3.
 
 
 
 0.906
AMX58914.1
Ribosome silencing factor RsfS.
   
 
 0.900
AMX57407.1
50S ribosomal protein L21.
   
   0.896
AMX57273.1
50S ribosomal protein L17.
  
   0.895
Your Current Organism:
Leptospira borgpetersenii Hardjo
NCBI taxonomy Id: 328971
Other names: L. borgpetersenii serovar Hardjo, Leptospira borgpetersenii serovar Hardjo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.