STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gatAglutamyl-tRNA(Gln) amidotransferase subunit A. (485 aa)    
Predicted Functional Partners:
AMX57128.1
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B.
 
 0.999
AMX58630.1
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C.
 
 0.999
AMX57097.1
glutamate--tRNA ligase.
  
 0.994
AMX58621.1
asparagine--tRNA ligase.
   
 0.991
AMX58628.1
Imidazole glycerol phosphate synthase subunit HisF.
    
  0.986
AMX58130.1
GMP synthase.
  
 
 0.984
AMX59118.1
Glutamate synthase.
    
 0.975
AMX59087.1
Carbamoyl phosphate synthase large subunit.
   
 
 0.963
AMX58015.1
aspartyl-tRNA synthetase.
  
 0.950
hisH
Glutamine amidotransferase.
  
 
  0.896
Your Current Organism:
Leptospira borgpetersenii Hardjo
NCBI taxonomy Id: 328971
Other names: L. borgpetersenii serovar Hardjo, Leptospira borgpetersenii serovar Hardjo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.