STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMX59261.1SET domain protein. (176 aa)    
Predicted Functional Partners:
AMX58723.1
ATP synthase subunit beta.
    
 0.952
AMX59642.1
RNA helicase.
   
 0.875
AMX57338.1
Hypothetical protein.
 
 0.829
AMX58380.1
NAD-dependent protein deacylase.
    
 0.800
AMX57604.1
Histone deacetylase.
  
 0.799
AMX58965.1
Histone deacetylase.
  
 0.799
AMX57297.1
Molecular chaperone DnaJ.
    
  0.787
AMX58319.1
Molecular chaperone DnaJ.
    
  0.787
AMX59211.1
Molecular chaperone DnaJ.
    
  0.787
AMX59428.1
Molecular chaperone DnaJ.
    
  0.787
Your Current Organism:
Leptospira borgpetersenii Hardjo
NCBI taxonomy Id: 328971
Other names: L. borgpetersenii serovar Hardjo, Leptospira borgpetersenii serovar Hardjo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.