STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMX60039.1glutamyl-tRNA reductase. (291 aa)    
Predicted Functional Partners:
AMX60042.1
Glutamate-1-semialdehyde 2,1-aminomutase.
 
 0.994
AMX60040.1
Uroporphyrinogen synthase.
 
  
 0.981
AMX60045.1
Uroporphyrinogen decarboxylase.
 
  
 0.937
AMX60041.1
Delta-aminolevulinic acid dehydratase.
 
  
 0.931
AMX60046.1
Coproporphyrinogen III oxidase.
 
  
 0.929
AMX60043.1
Histidine kinase.
 
   
 0.910
AMX60044.1
Chemotaxis protein CheY.
 
   
 0.861
AMX60048.1
Protoporphyrinogen oxidase.
 
   
 0.795
AMX58438.1
Chromosome segregation protein SMC.
  
  
  0.766
AMX57415.1
N-acetylmuramoyl-L-alanine amidase.
  
     0.697
Your Current Organism:
Leptospira borgpetersenii Hardjo
NCBI taxonomy Id: 328971
Other names: L. borgpetersenii serovar Hardjo, Leptospira borgpetersenii serovar Hardjo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.