STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2AP53Uncharacterized protein. (120 aa)    
Predicted Functional Partners:
A0A1Y2CMT6
NMDA receptor regulated 1-like protein, isoform CRA_b.
    
 
 0.925
A0A1Y2C0F4
Acyl-CoA N-acyltransferase.
   
 
 0.904
A0A1Y2CD99
Acyl-CoA N-acyltransferase.
   
 
 0.904
A0A1Y2BV08
Uncharacterized protein.
    
 
 0.614
A0A1Y2BW85
N-acetyltransferase domain-containing protein.
    
 
 0.614
A0A1Y2BW98
Uncharacterized protein.
    
 
 0.614
A0A1Y2CF39
Uncharacterized protein.
    
 
 0.614
A0A1Y2CYG2
Prefoldin.
   
  
 0.541
A0A1Y2BVH6
C2H2-type domain-containing protein.
    
 
 0.504
A0A1Y2C6Z1
Ubiquitin.
   
 
 0.435
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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