STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2APB5Uncharacterized protein. (946 aa)    
Predicted Functional Partners:
A0A1Y2CLY3
Mo25-like protein.
   
 0.697
A0A1Y2CD22
Transport protein Sec61 subunit gamma.
   
 
 0.678
A0A1Y2CK26
Uncharacterized protein.
    
 
 0.668
A0A1Y2D3R1
DnaJ-domain-containing protein.
    
 
 0.668
A0A1Y2CL24
Sec62-domain-containing protein.
    
 
 0.664
A0A1Y2CWM6
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.610
A0A1Y2BQM3
SecY protein; Belongs to the SecY/SEC61-alpha family.
    
 
 0.604
A0A1Y2C543
SecY protein.
    
 
 0.604
A0A1Y2CWG0
AMPKBI-domain-containing protein.
     
 0.500
A0A1Y1ZET3
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
   
  0.495
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.