STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2APZ8Uncharacterized protein. (416 aa)    
Predicted Functional Partners:
A0A1Y2CHD3
Riboflavin synthase.
  
 0.917
A0A1Y2D0I7
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
  
 
 0.913
A0A1Y2AS73
DUF1688-domain-containing protein.
 
  
 0.806
A0A1Y2C107
Nucleoside diphosphate kinase; Belongs to the NDK family.
  
 0.773
A0A1Y2CFW6
Nucleoside diphosphate kinase; Belongs to the NDK family.
  
 0.773
A0A1Y2BW66
Coronin; Belongs to the WD repeat coronin family.
  
 0.771
A0A1Y2CPZ3
Coronin; Belongs to the WD repeat coronin family.
  
 0.771
A0A1Y2B1G8
DUF1688-domain-containing protein.
 
  
 0.756
A0A1Y2BI54
P-loop containing nucleoside triphosphate hydrolase protein.
    
  0.747
A0A1Y2CKA1
P-loop containing nucleoside triphosphate hydrolase protein.
    
  0.747
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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