STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2ASP1Cnd3 domain-containing protein. (809 aa)    
Predicted Functional Partners:
A0A1Y2CRB1
Uncharacterized protein.
   
 0.993
A0A1Y2BSE5
SMC hinge domain-containing protein.
   
 0.991
A0A1Y2CY97
Structural maintenance of chromosomes protein.
   
 0.991
A0A1Y2CVH0
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.
   
 0.986
A0A1Y2CMP7
Structural maintenance of chromosomes protein.
   
 0.891
A0A1Y2B8V6
SMC_N domain-containing protein.
   
 0.875
A0A1Y2CI12
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.865
A0A1Y2BAM7
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.850
A0A1Y2C3I6
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.850
BCR33DRAFT_965
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.814
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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