STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2B5Y9Uncharacterized protein. (254 aa)    
Predicted Functional Partners:
A0A1Y2CXR4
WD40 repeat-like protein.
   
 0.669
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.655
A0A1Y2CJ47
Ipi1_N domain-containing protein.
    
 0.652
A0A1Y2B7M9
RhoGAP-domain-containing protein.
    
 0.646
A0A1Y2CMM1
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.631
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.620
A0A1Y2CMK6
Las1-domain-containing protein.
    
  0.600
A0A1Y2CE73
Calreticulin.
    
 0.595
A0A1Y2CL05
P-loop containing nucleoside triphosphate hydrolase protein.
   
  0.594
A0A1Y2D4N2
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
  0.590
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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