STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2B8F4Terpenoid synthase; Belongs to the FPP/GGPP synthase family. (357 aa)    
Predicted Functional Partners:
A0A1Y2C704
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
  
 0.916
A0A1Y2D2R0
Terpenoid synthase; Belongs to the FPP/GGPP synthase family.
    
 0.915
A0A1Y2CZD3
Tryptophan synthase.
    
 0.895
A0A1Y2CTN6
Isopentenyldiphosphate isomerase.
  
 
 0.893
A0A1Y2CH78
Terpenoid synthase.
  
 0.880
A0A1Y2CH81
Farnesyl-diphosphate farnesyltransferase.
  
 0.880
A0A1Y2D0U6
Terpenoid synthase.
  
 0.877
A0A1Y2BTW9
FMN-dependent alpha-hydroxy acid dehydrogenase.
  
 
 0.872
A0A1Y2CNR0
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 0.861
A0A1Y2B7E0
Protein prenylyltransferase.
     
 0.851
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.