STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BDS0Uncharacterized protein. (994 aa)    
Predicted Functional Partners:
A0A1Y2CYK4
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.741
A0A1Y2C8S5
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.710
A0A1Y2ACV4
Uncharacterized protein.
    
 0.707
A0A1Y2C428
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.680
A0A1Y2CSA2
PCNA_C domain-containing protein.
  
 0.680
A0A1Y2AYD1
UBC-like protein.
    
 0.677
A0A1Y2C795
RNA polymerase Rpb6.
   
 0.677
A0A1Y2D1S1
WAC domain-containing protein.
   
 0.677
A0A1Y2CPW4
Insert subdomain of RNA polymerase alpha subunit.
   
 0.656
A0A1Y2CV36
RBP11-like subunits of RNA polymerase.
   
 0.656
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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